You have noticed my quest to kill of /root/Startup?
Every one we can shift out of there will be for the better.
I think the touchpad thing can be started from a .desktop file, numlockx too (that will require some adjustments to /usr/sbin/quicksetup), xbindkeys, anything really. We'll leave the dir there though because why cause headaches for noobs when they whine about their app not starting?
There is one in there for frisbee, put there by rerwin, network_tray_modeset. I don't think it does anything, just a marker/config file. Weird place for it.
By the way, you can't add it to a pull request because it's not in woof. It's a pet. I'll track it down and upgrade it.